Burke SV, Wysocki WP, Zuloaga FO, Craine JM, Pires JC, Edger PP, Mayfield-Jones D, Clark LG, Kelchner SA, and Duvall MR. (2016) Evolutionary relationships in Panicoid grasses based on plastome phylogenomics (Panicoideae; Poaceae). BMC Plant Biology Link

Barrett CF, Baker WJ, Comer JR, Conran JG, Lahmeyer SC, Leebens-Mack JH, Li J, Lim GS, Mayfield-Jones DR, Perez LG, Medina J, Pires JC, Santos C, Stevenson DW, Zomlefer WB, Davis JI (2015). Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots. New Phytologist. Link


Cotton JL, Wysocki WP, Clark LG, Kelchner SA, Pires JC, Edger PP, Mayfield-Jones D, and Duvall MR (2015). Resolving deep relationships of PACMAD grasses; a phylogenomic approach. BMC Plant Biology. Link

Saarela JM, Wysocki WP, BarrettC, Soreng RJ, Davis JI, Clark LG, Kelchner SA,  Pires JC, Edger PP, Mayfield DR, and Duvall, MR (2015). Plastid phylogenomics of the cool-season grass subfamily: Clarification of relationships among early-diverging tribes. AoB PLANTS. Link


Barrett CF, Freudenstein JV, Li J, Mayfield-Jones D, Perez L, Pires JC, Santos C. (2014). “Investigating the path of plastic genome degradation in an early-transitional clade of fungus-eating orchids, and implications for parasitic angiosperms.” MBE Link

Wysocki WP, Clark LG, Kelchner SA, Burke SV, Pires JC, Edger PP, Mayfield-Jones D, Triplett JK, Columbus JT, Ingram AL, Duvall MR (2014). “A Multi-Step Comparison of Short-Read Full Plastome Sequence Assembly Methods in Grasses.” Taxon Link

Mayfield-Jones D (2014). Masters thesis: Occurrence and Implications of Biological Network Evolution Following Polyploidy (2014) Download

Edger PP, Tang M, Bird KA, Mayfield-Jones D, Conant GC, Mummenhoff K, Koch MA, Pires JC (2014). “Secondary Structure Analyses of the nuclear rRNA Internal Transcribed Spacers and Assessment of its Phylogenetic Utility across the Brassicaceae (Mustards).” PLOS ONE Link


Mayfield-Jones D, Washburn JD, Arias T, Edger PP, Pires JC, Conant GC (2013). “Watching the grin fade: Tracing the effects of polyploidy on different evolutionary time scales.” Sem Cell & Dev Bio. Link


Steele PR, Hertweck KL, Mayfield D, McKain MR, Leebens-Mack J, Pires JC (2012). “Quality and quantity of data recovered from massively parallel sequencing: Examples in Asparagales and Poaceae.” Am J Bot. Link


Mayfield D, Chen ZJ, Pires JC (2011). “Epigenetic regulation of flowering time in polyploids.” Curr Opin Plant Biol 14(2): 174-178. Link


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